Applied Mathematics and Mechanics (English Edition) ›› 2008, Vol. 29 ›› Issue (3): 379-387 .doi: https://doi.org/10.1007/s10483-008-0309-x

• Articles • Previous Articles     Next Articles

"Final all possible steps" approach for accelerating stochastic simulation of coupled chemical reactions

ZHOU Wen, PENG Xin-jun, LIU Xiang, YAN Zheng-lou, WANG Yi-fei   

    1. Department of Mathematics, Shanghai University, Shanghai 200444, P. R. China;
    2. Department of Mathematics, Anhui Normal University, Wuhu 241000, Anhui Province, P. R. China
  • Received:2007-08-03 Revised:2008-01-05 Online:2008-03-10 Published:2008-03-10
  • Contact: WANG Yi-fei

Abstract: In this paper, we develop a modified accelerated stochastic simulation method for chemically reacting systems, called the "final all possible steps" (FAPS) method, which obtains the reliable statistics of all species in any time during the time course with fewer simulation times. Moreover, the FAPS method can be incorporated into the leap methods, which makes the simulation of larger systems more efficient. Numerical results indicate that the proposed methods can be applied to a wide range of chemically reacting systems with a high-precision level and obtain a significant improvement on efficiency over the existing methods.

Key words: "final all possible steps" approach, stochastic simulation algorithm, chemically reacting systems

2010 MSC Number: 

APS Journals | CSTAM Journals | AMS Journals | EMS Journals | ASME Journals